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    Prr29 proline rich 29 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 287761, updated on 5-Mar-2024

    Summary

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    Official Symbol
    Prr29provided by RGD
    Official Full Name
    proline rich 29provided by RGD
    Primary source
    RGD:1307288
    See related
    Ensembl:ENSRNOG00000060193 AllianceGenome:RGD:1307288
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    RGD1307288
    Summary
    Orthologous to human PRR29 (proline rich 29). [provided by Alliance of Genome Resources, Apr 2022]
    Expression
    Biased expression in Lung (RPKM 129.5), Thymus (RPKM 103.2) and 8 other tissues See more
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    10q32.1
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 10 NC_086028.1 (91804291..91810213)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 10 NC_051345.1 (91305820..91320661)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 10 NC_005109.4 (94565498..94569926)

    Chromosome 10 - NC_086028.1Genomic Context describing neighboring genes Neighboring gene CD79b molecule Neighboring gene sodium voltage-gated channel alpha subunit 4 Neighboring gene uncharacterized LOC108352146 Neighboring gene intercellular adhesion molecule 2 Neighboring gene endoplasmic reticulum to nucleus signaling 1 Neighboring gene ribosomal protein S10, pseudogene 6 Neighboring gene uncharacterized LOC102546698 Neighboring gene small nucleolar RNA, C/D box 104

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    General protein information

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    Preferred Names
    proline-rich protein 29

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086028.1 Reference GRCr8

      Range
      91804291..91810213
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_063270160.1 → XP_063126230.1  proline-rich protein 29 isoform X1

    2. XM_063270161.1 → XP_063126231.1  proline-rich protein 29 isoform X2

    3. XM_063270163.1 → XP_063126233.1  proline-rich protein 29 isoform X5

    4. XM_063270165.1 → XP_063126235.1  proline-rich protein 29 isoform X7

    5. XM_213490.11 → XP_213490.2  proline-rich protein 29 isoform X3

      See identical proteins and their annotated locations for XP_213490.2

      UniProtKB/TrEMBL
      A0A0G2K7K1
      Related
      ENSRNOP00000074239.1
      Conserved Domains (1) summary
      pfam15248
      Location:42 → 83
      DUF4587; Domain of unknown function (DUF4587)

    6. XM_063270162.1 → XP_063126232.1  proline-rich protein 29 isoform X4

    7. XM_063270164.1 → XP_063126234.1  proline-rich protein 29 isoform X6

    Nucleotide Protein Strain
    Heading Accession and Version

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